Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
W5KMN5_ASTMXANK_REP_REGION domain-containing protein. (520 aa)    
Predicted Functional Partners:
DLK1
Delta like non-canonical Notch ligand 1.
    
   0.621
rpl34
Ribosomal protein L34.
      
 0.452
rpl14
Ribosomal protein L14.
      
 0.439
smim7
Small integral membrane protein 7.
      
 0.424
rpl37a
Ribosomal protein L37a.
      
 0.411
use1
Unconventional SNARE in the ER 1 homolog (S. cerevisiae).
      
 0.407
zmpste24
CAAX prenyl protease; Proteolytically removes the C-terminal three residues of farnesylated proteins; Belongs to the peptidase M48A family.
      
 0.406
Dhcr24
24-dehydrocholesterol reductase.
      
 0.404
sec23ip
SEC23 interacting protein.
   
  
 0.402
LOC103023096
DDHD domain containing 2.
   
  
 0.402
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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