Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103045094THAP-type domain-containing protein. (3706 aa)    
Predicted Functional Partners:
rims3
Regulating synaptic membrane exocytosis 3.
      
 0.712
LOC103042161
DnaJ (Hsp40) homolog, subfamily C, member 3b.
    
 0.502
dnajc3
DnaJ (Hsp40) homolog, subfamily C, member 3a.
    
 0.502
LOC103040272
Oxysterol-binding protein; Belongs to the OSBP family.
      
 0.496
LOC103046556
Oxysterol-binding protein; Belongs to the OSBP family.
      
 0.496
LOC103039823
NME/NM23 family member 8; Belongs to the NDK family.
    
 0.456
W5JXG1_ASTMX
Uncharacterized protein.
    
 0.440
W5L0L4_ASTMX
Uncharacterized protein.
    
 0.440
LOC103027070
Uncharacterized protein.
    
 0.440
ENSAMXP00000048880
Uncharacterized protein.
    
 0.440
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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