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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5KNS5_ASTMXMyosin XVIIIAb; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1966 aa)    
Predicted Functional Partners:
LOC103022703
Myosin, light chain 1, alkali; skeletal, fast.
   
 0.791
LOC103021650
Myosin, light chain 6, alkali, smooth muscle and non-muscle.
   
 0.555
LOC103026687
Myosin, light chain 4, alkali; atrial, embryonic.
   
 0.555
ENSAMXP00000039253
Uncharacterized protein.
   
 0.555
myl7
Myosin, light chain 7, regulatory.
   
 0.509
LOC103022187
Myosin, light chain 9a, regulatory.
   
 0.509
LOC103039566
Uncharacterized protein.
   
 0.509
ENSAMXP00000045035
Uncharacterized protein.
   
 0.509
LOC103045271
Myosin, light chain 9b, regulatory.
   
 0.509
chrac1
Chromatin accessibility complex subunit 1.
    
 
 0.505
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.