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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5KNZ6_ASTMXSlit homolog 1a (Drosophila). (1507 aa)    
Predicted Functional Partners:
ENSAMXP00000043280
Roundabout, axon guidance receptor, homolog 2 (Drosophila).
   
 0.905
ENSAMXP00000045289
Roundabout, axon guidance receptor, homolog 1 (Drosophila).
   
 0.872
Robo4
Roundabout, axon guidance receptor, homolog 4 (Drosophila).
   
 0.867
W5K2I5_ASTMX
Uncharacterized protein.
   
 0.766
W5K2J7_ASTMX
Uncharacterized protein.
   
 0.759
ENSAMXP00000030127
Ig-like domain-containing protein.
   
 0.752
LOC111191060
Netrin 1b.
    
 
 0.625
ENSAMXP00000029526
Adhesion G protein-coupled receptor L1a; Belongs to the G-protein coupled receptor 2 family.
   
 
 0.594
adgrl2
Adhesion G protein-coupled receptor L2a; Belongs to the G-protein coupled receptor 2 family.
   
 
 0.594
LOC103031661
Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.
   
 
 0.594
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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