Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
W5KP69_ASTMXProtein tyrosine phosphatase receptor type K. (1395 aa)    
Predicted Functional Partners:
LOC103038497
ADP-ribosylation factor 1; Belongs to the small GTPase superfamily. Arf family.
    
 0.734
lypla2
Lysophospholipase 2.
      
 0.626
fras1
Fraser extracellular matrix complex subunit 1.
   
 0.623
ctnnb1
Catenin (cadherin-associated protein), beta 1.
    
 0.617
LOC103034575
Catenin, beta 2.
    
  0.610
ECHDC1
Ethylmalonyl-CoA decarboxylase 1.
      
 0.536
ENSAMXP00000038912
Uncharacterized protein.
    
 0.521
ENSAMXP00000054481
Si:ch211-79k12.1.
    
 0.521
W5KBS8_ASTMX
ARVCF delta catenin family member b.
   
 0.512
ENSAMXP00000029217
Uncharacterized protein.
   
 0.512
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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