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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5KPH6_ASTMXMyosin, light polypeptide 3, skeletal muscle. (157 aa)    
Predicted Functional Partners:
W5L1R1_ASTMX
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
    
 0.699
Cask
Calcium/calmodulin-dependent serine protein kinase a; Belongs to the MAGUK family.
    
 0.699
LOC103045793
Myosin light chain, phosphorylatable, fast skeletal muscle a.
   
 0.650
LOC103046635
Myosin light chain, phosphorylatable, fast skeletal muscle b.
   
 0.650
ENSAMXP00000043943
Troponin T3, fast skeletal type.
   
 0.638
ENSAMXP00000046341
Troponin T type 3a (skeletal, fast).
   
 0.638
LOC103039046
Myosin, light chain 10, regulatory.
   
0.602
myl7
Myosin, light chain 7, regulatory.
   
 0.602
LOC103022187
Myosin, light chain 9a, regulatory.
   
0.602
LOC103039566
Uncharacterized protein.
   
0.602
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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