Eys protein (Astyanax mexicanus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

Eys

Uncharacterized protein. (327 aa)

Predicted Functional Partners:

rbpj

0.806

LOC103029567

0.784

ENSAMXP00000031417

0.584

maml1

0.580

Ush2a

0.576

snw1

0.545

Crebbp

0.529

Egf

0.517

W5KLW4_ASTMX

0.506

jag1

0.506

Your Current Organism:

Astyanax mexicanus

NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Crebbp	ENSAMXP00000031417	ENSAMXP00000043375	ENSAMXP00000031417	CREB binding protein a.	Uncharacterized protein.	0.529
Crebbp	Eys	ENSAMXP00000043375	ENSAMXP00000009505	CREB binding protein a.	Uncharacterized protein.	0.529
Crebbp	LOC103029567	ENSAMXP00000043375	ENSAMXP00000011492	CREB binding protein a.	Recombination signal binding protein for immunoglobulin kappa J region a.	0.895
Crebbp	maml1	ENSAMXP00000043375	ENSAMXP00000035961	CREB binding protein a.	Mastermind-like transcriptional coactivator 1.	0.952
Crebbp	rbpj	ENSAMXP00000043375	ENSAMXP00000011127	CREB binding protein a.	Recombination signal binding protein for immunoglobulin kappa J region b.	0.895
Crebbp	snw1	ENSAMXP00000043375	ENSAMXP00000009394	CREB binding protein a.	SNW domain containing 1.	0.703
ENSAMXP00000031417	Crebbp	ENSAMXP00000031417	ENSAMXP00000043375	Uncharacterized protein.	CREB binding protein a.	0.529
ENSAMXP00000031417	Eys	ENSAMXP00000031417	ENSAMXP00000009505	Uncharacterized protein.	Uncharacterized protein.	0.584
ENSAMXP00000031417	LOC103029567	ENSAMXP00000031417	ENSAMXP00000011492	Uncharacterized protein.	Recombination signal binding protein for immunoglobulin kappa J region a.	0.784
ENSAMXP00000031417	Ush2a	ENSAMXP00000031417	ENSAMXP00000037750	Uncharacterized protein.	Uncharacterized protein.	0.459
ENSAMXP00000031417	W5KLW4_ASTMX	ENSAMXP00000031417	ENSAMXP00000008576	Uncharacterized protein.	Uncharacterized protein.	0.506
ENSAMXP00000031417	jag1	ENSAMXP00000031417	ENSAMXP00000011031	Uncharacterized protein.	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.	0.506
ENSAMXP00000031417	maml1	ENSAMXP00000031417	ENSAMXP00000035961	Uncharacterized protein.	Mastermind-like transcriptional coactivator 1.	0.580
ENSAMXP00000031417	rbpj	ENSAMXP00000031417	ENSAMXP00000011127	Uncharacterized protein.	Recombination signal binding protein for immunoglobulin kappa J region b.	0.784
ENSAMXP00000031417	snw1	ENSAMXP00000031417	ENSAMXP00000009394	Uncharacterized protein.	SNW domain containing 1.	0.539
Egf	Eys	ENSAMXP00000048756	ENSAMXP00000009505	Uncharacterized protein.	Uncharacterized protein.	0.517
Eys	Crebbp	ENSAMXP00000009505	ENSAMXP00000043375	Uncharacterized protein.	CREB binding protein a.	0.529
Eys	ENSAMXP00000031417	ENSAMXP00000009505	ENSAMXP00000031417	Uncharacterized protein.	Uncharacterized protein.	0.584
Eys	Egf	ENSAMXP00000009505	ENSAMXP00000048756	Uncharacterized protein.	Uncharacterized protein.	0.517
Eys	LOC103029567	ENSAMXP00000009505	ENSAMXP00000011492	Uncharacterized protein.	Recombination signal binding protein for immunoglobulin kappa J region a.	0.784