close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hoxc5Homeobox C5a. (273 aa)    
Predicted Functional Partners:
hoxc6
Homeobox C6a.
   
 
0.900
LOC103023568
Homeobox A4.
   
 
0.897
hoxb7
Homeobox B7a.
  
 
0.659
hoxd4
Homeobox D4a.
   
  
0.637
hoxb4
Homeobox B4a.
   
  
0.624
LOC103030519
Homeobox B6b.
  
 
0.612
LOC103045875
Homeobox B6a.
   
 
0.594
fgf5
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
   
 
 0.591
LOC111192049
Homeobox B5a.
  
  
0.587
LOC103029979
Homeobox B5b.
  
  
0.587
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.