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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5KQ22_ASTMXSyntaxin binding protein 6 (amisyn), like. (263 aa)    
Predicted Functional Partners:
Prkci
Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
    
 
 0.618
LOC103044996
Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
    
 
 0.618
pard6a
Par-6 family cell polarity regulator alpha.
    
 
 0.548
LOC111193453
Par-6 family cell polarity regulator gamma a.
    
 
 0.548
LOC103026002
Par-6 family cell polarity regulator gamma b.
    
 
 0.548
pard6b
Par-6 partitioning defective 6 homolog beta (C. elegans).
    
 
 0.548
Exoc4
Exocyst complex component 4.
    
 
 0.478
exoc8
Exocyst complex component 8.
    
 
 0.442
snap25
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
    
 
 0.427
W5KSW2_ASTMX
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
    
 
 0.427
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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