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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kat8Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (514 aa)    
Predicted Functional Partners:
Meaf6
MYST/Esa1-associated factor 6.
    
 0.907
ruvbl1
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.
   
 0.894
MSL3
MSL complex subunit 3.
    
 0.871
Trrap
Transformation/transcription domain-associated protein; Belongs to the PI3/PI4-kinase family.
   
 0.870
morf4l1
Mortality factor 4 like 1.
   
 0.846
Dmap1
DNA methyltransferase 1 associated protein 1.
   
 0.841
LOC103023204
MSL complex subunit 2b.
   
 0.840
LOC103026968
MSL complex subunit 1b.
    
 0.838
LOC111192052
MSL complex subunit 1a.
    
 0.838
LOC103029372
MSL complex subunit 2a.
   
 0.829
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.