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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cfap52Cilia and flagella associated protein 52. (617 aa)    
Predicted Functional Partners:
cfap53
Cilia and flagella associated protein 53.
   
 0.898
cfap45
Cilia and flagella associated protein 45.
   
 
 0.893
efhc1
EF-hand domain (C-terminal) containing 1.
  
 
 0.889
Rbbp5
Retinoblastoma binding protein 5.
   
 0.867
ash2l
Ash2 like, histone lysine methyltransferase complex subunit.
   
 0.865
cfap161
Cilia and flagella associated protein 161.
   
 0.852
tekt3
Tektin 3.
   
 
 0.849
tekt4
Tektin 4.
   
 
 0.849
cfap126
Cilia and flagella associated protein 126.
   
   0.836
pacrg
PARK2 co-regulated.
   
 
 0.830
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.