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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5KRZ6_ASTMXUncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1916 aa)    
Predicted Functional Partners:
LOC103022703
Myosin, light chain 1, alkali; skeletal, fast.
   
 0.797
LOC103021650
Myosin, light chain 6, alkali, smooth muscle and non-muscle.
   
 0.566
LOC103026687
Myosin, light chain 4, alkali; atrial, embryonic.
   
 0.566
ENSAMXP00000039253
Uncharacterized protein.
   
 0.566
LOC103022187
Myosin, light chain 9a, regulatory.
   
 0.519
LOC103039566
Uncharacterized protein.
   
 0.519
ENSAMXP00000045035
Uncharacterized protein.
   
 0.519
LOC103045271
Myosin, light chain 9b, regulatory.
   
 0.519
myl7
Myosin, light chain 7, regulatory.
   
 0.509
W5KS79_ASTMX
Tropomyosin 2 (beta); Belongs to the tropomyosin family.
   
 0.506
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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