Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC103041664Transient receptor potential cation channel, subfamily M, member 4a. (1277 aa)    
Predicted Functional Partners:
ENSAMXP00000046598
Transient receptor potential cation channel, subfamily V, member 1.
   
 
 0.711
Trpv4
Transient receptor potential cation channel, subfamily V, member 4; Belongs to the transient receptor (TC 1.A.4) family.
   
 
 0.705
LOC103028240
Transient receptor potential cation channel, subfamily V, member 6; Belongs to the transient receptor (TC 1.A.4) family.
   
 
 0.701
trpc1
Transient receptor potential cation channel, subfamily C, member 1; Belongs to the transient receptor (TC 1.A.4) family.
    
 0.691
nudt9
Nudix (nucleoside diphosphate linked moiety X)-type motif 9.
 
   
 0.645
LOC103022174
Transient receptor potential cation channel, subfamily A, member 1a; Belongs to the transient receptor (TC 1.A.4) family.
     
 0.644
ppp1cc
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
  0.560
LOC103034594
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
  0.560
LOC103033313
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
  0.560
LOC103034518
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
  0.560
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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