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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103026467RAS protein activator like 3. (1135 aa)    
Predicted Functional Partners:
LOC103022019
Rho GTPase activating protein 35b.
    
 0.609
arhgap5
Rho GTPase activating protein 5.
    
 0.609
arhgap35
Uncharacterized protein.
    
 0.609
LOC103046634
Rho guanine nucleotide exchange factor (GEF) 3, like.
   
  
 0.582
rasa1
RAS p21 protein activator (GTPase activating protein) 1a.
     
0.567
ENSAMXP00000033661
Uncharacterized protein.
    
 0.510
LOC103027364
Docking protein 1b.
    
 
 0.482
W5KGH6_ASTMX
Neurofibromin 1b.
    
0.478
W5KT32_ASTMX
Neurofibromin 1a.
    
0.478
LOC103036376
Uncharacterized protein.
    
0.476
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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