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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mkln1Muskelin 1, intracellular mediator containing kelch motifs. (643 aa)    
Predicted Functional Partners:
gid8
GID complex subunit 8 homolog b (S. cerevisiae).
    
 
 0.839
rmnd5b
Required for meiotic nuclear division 5 homolog B.
    
 
 0.806
sec63
SEC63 homolog, protein translocation regulator.
      
 0.803
armc8
Armadillo repeat containing 8.
   
 
 0.784
ranbp9
RAN binding protein 9.
    
 
 0.771
ranbp10
RAN binding protein 10.
    
 
 0.771
maea
Macrophage erythroblast attacher.
    
 
 0.717
WDR26
WD repeat domain 26.
   
 
 0.699
LOC103044372
WD repeat domain 26b.
   
 
 0.699
LOC103047376
Zgc:66447.
      
 0.677
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.