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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RrasRAS related. (203 aa)    
Predicted Functional Partners:
araf
A-Raf proto-oncogene, serine/threonine kinase.
   
 0.953
Braf
B-Raf proto-oncogene, serine/threonine kinase.
   
 0.953
LOC103027930
Raf-1 proto-oncogene, serine/threonine kinase b.
   
 0.953
rasa1
RAS p21 protein activator (GTPase activating protein) 1a.
    
 0.946
LOC103036376
Uncharacterized protein.
    
 0.944
map3k1
Mitogen-activated protein kinase kinase kinase 1, E3 ubiquitin protein ligase.
   
 0.938
arhgef6
Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6.
    
 0.930
W5KA75_ASTMX
Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
   
 0.927
W5KGH6_ASTMX
Neurofibromin 1b.
    
 0.842
W5KT32_ASTMX
Neurofibromin 1a.
    
 0.842
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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