Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
clip3CAP-GLY domain containing linker protein 3. (539 aa)    
Predicted Functional Partners:
W5KT96_ASTMX
Cylindromatosis (turban tumor syndrome), like.
    
 0.706
cyld
Cylindromatosis (turban tumor syndrome), a; Belongs to the peptidase C19 family.
    
 0.706
W5LQN4_ASTMX
Uncharacterized protein.
    
  0.653
tbrg1
Transforming growth factor beta regulator 1.
      
 0.646
mtor
Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.
   
 0.602
Phkb
Phosphorylase b kinase regulatory subunit; Phosphorylase b kinase catalyzes the phosphorylation of serine in certain substrates, including troponin I.
      
 0.598
gpaa1
Glycosylphosphatidylinositol anchor attachment 1.
     
  0.585
pigg
Phosphatidylinositol glycan anchor biosynthesis class G.
     
  0.585
pigk
GPI-anchor transamidase; Mediates GPI anchoring in the endoplasmic reticulum, by replacing a protein's C-terminal GPI attachment signal peptide with a pre-assembled GPI. During this transamidation reaction, the GPI transamidase forms a carbonyl intermediate with the substrate protein. Belongs to the peptidase C13 family.
     
  0.585
Pigt
Phosphatidylinositol glycan anchor biosynthesis, class T.
     
  0.585
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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