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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5KSW2_ASTMXSynaptosomal-associated protein; Belongs to the SNAP-25 family. (193 aa)    
Predicted Functional Partners:
vamp3
Vesicle-associated membrane protein 3 (cellubrevin).
   
 0.947
vamp2
Vesicle-associated membrane protein 2.
   
 0.903
ENSAMXP00000050742
Uncharacterized protein.
   
 0.882
ENSAMXP00000034378
Zgc:92912.
   
 0.846
LOC103030083
Vesicle-associated membrane protein 1.
   
 0.846
vamp7
Synaptobrevin-like 1; Belongs to the synaptobrevin family.
    
 0.839
syt1
Synaptotagmin Ia.
   
 0.837
W5JZI3_ASTMX
C2 domain-containing protein.
   
 0.837
LOC103042251
Synaptotagmin IIa.
   
 0.837
LOC103029888
Synaptotagmin Vb.
   
 0.837
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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