Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
rassf8Ras association domain family member 8b. (414 aa)    
Predicted Functional Partners:
W5KYP8_ASTMX
Par-3 family cell polarity regulator alpha, b.
    
 
 0.628
PARD3
Par-3 family cell polarity regulator.
    
 
 0.628
gnptab
N-acetylglucosamine-1-phosphate transferase subunits alpha and beta.
    
   0.605
ENSAMXP00000030966
Uncharacterized protein.
    
 
 0.564
ENSAMXP00000047114
Interleukin 10 receptor, beta.
    
 
 0.564
W5KB03_ASTMX
Protein phosphatase 1, regulatory subunit 13 like.
    
 
 0.549
W5KCU5_ASTMX
Tumor protein p53 binding protein, 2a.
    
 
 0.549
ppp1r13b
Protein phosphatase 1, regulatory subunit 13Bb.
    
 
 0.549
ENSAMXP00000048561
Protein phosphatase 1, regulatory subunit 13Ba.
    
 
 0.549
LOC103038312
Si:ch73-205h11.1.
    
   0.525
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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