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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5KT60_ASTMXSET nuclear proto-oncogene b; Belongs to the nucleosome assembly protein (NAP) family. (300 aa)    
Predicted Functional Partners:
LOC103026007
Anti-silencing function 1Ba histone chaperone.
   
 
 0.745
anp32e
Acidic (leucine-rich) nuclear phosphoprotein 32 family, member E.
   
 0.671
Anp32b
Acidic (leucine-rich) nuclear phosphoprotein 32 family, member B.
   
 0.671
ENSAMXP00000034887
Acidic (leucine-rich) nuclear phosphoprotein 32 family, member A.
   
 0.671
LOC103035064
Uncharacterized protein.
   
 0.671
W5KZA4_ASTMX
Uncharacterized protein.
     
 0.641
Mcph1
BRCT domain-containing protein.
     
 0.640
LOC103037668
Histone H2A; Belongs to the histone H2A family.
   
 
 0.616
H2AZ1
Histone H2A; Belongs to the histone H2A family.
   
 
 0.616
LOC103039302
Histone H2A; Belongs to the histone H2A family.
   
 
 0.616
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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