Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
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[Homology]
Score
W5KTJ0_ASTMXUncharacterized protein. (1774 aa)    
Predicted Functional Partners:
W5LL44_ASTMX
Chromodomain helicase DNA binding protein 4a.
  
  
 
0.964
mta2
Metastasis associated 1 family, member 2.
   
 0.920
mta1
Metastasis associated 1.
   
 0.885
LOC103047709
Metastasis associated 1 family, member 3.
   
 0.885
GATAD2A
GATA zinc finger domain containing 2A.
   
 0.865
LOC111192506
GATA zinc finger domain containing 2Ab.
   
 0.865
LOC103037451
GATA-type domain-containing protein.
   
 0.858
W5L5J8_ASTMX
GATA zinc finger domain containing 2B.
   
 0.858
HDAC2
Histone deacetylase 2; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes.
   
 0.843
LOC103046670
Histone deacetylase 1; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes.
   
 0.843
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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