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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5KTL1_ASTMXProtein tyrosine phosphatase non-receptor type 6. (563 aa)    
Predicted Functional Partners:
gab1
GRB2-associated binding protein 1.
    
 0.946
LOC103046713
Growth factor receptor-bound protein 2a.
   
0.841
LOC103046713-2
Growth factor receptor-bound protein 2-like.
   
0.841
LOC111191028
Growth factor receptor-bound protein 2b.
   
0.841
W5KG64_ASTMX
Si:dkey-237i9.8.
   
 0.833
W5LCK6_ASTMX
Platelet-derived growth factor receptor, beta polypeptide; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.
   
 0.803
ENSAMXP00000045536
Platelet/endothelial cell adhesion molecule 1.
   
 0.795
gab2
GRB2-associated binding protein 2.
    
 0.794
Sos2
Son of sevenless homolog 2 (Drosophila).
    
 0.788
sos1
Son of sevenless homolog 1 (Drosophila).
    
 0.788
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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