Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
W5KTR9_ASTMXUncharacterized protein. (1029 aa)    
Predicted Functional Partners:
hnrnpk
Heterogeneous nuclear ribonucleoprotein K.
   
 
 0.710
LOC103043638
Heterogeneous nuclear ribonucleoprotein K, like.
   
 
 0.710
W5L9Q8_ASTMX
Heterogeneous nuclear ribonucleoprotein M.
   
 0.585
nono
Non-POU domain containing, octamer-binding.
   
 
 0.527
LOC103044966
TAR DNA binding protein.
   
 0.520
tardbp
TAR DNA binding protein, like.
   
 0.520
LOC103036301
Paraspeckle component 1.
   
 
 0.517
W5L0Y9_ASTMX
TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
   
 
 0.491
fus
FUS RNA binding protein.
   
 
 0.491
eif4a3
Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family.
   
  0.483
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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