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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC39A1Solute carrier family 39 member 1. (323 aa)    
Predicted Functional Partners:
W5LG45_ASTMX
Sorting and assembly machinery component 50 homolog, like.
    
 
 0.720
ENSAMXP00000027492
SAMM50 sorting and assembly machinery component.
    
 
 0.720
LOC103044318
Metaxin.
    
 
 0.664
LOC103026555
Metaxin.
    
 
 0.664
mtx3
Metaxin.
    
 
 0.664
SLC39A11
Solute carrier family 39 member 11.
   
 0.633
ENSAMXP00000048058
Solute carrier family 39 member 7.
   
 0.591
TOMM7
Translocase of outer mitochondrial membrane 7.
    
 
 0.568
tomm22
Translocase of outer mitochondrial membrane 22 homolog (yeast).
    
 
 0.566
timm13
Translocase of inner mitochondrial membrane 13 homolog (yeast); Belongs to the small Tim family.
   
 
 0.564
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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