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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5KV19_ASTMXUncharacterized protein. (178 aa)    
Predicted Functional Partners:
pgk1
Phosphoglycerate kinase.
   
 0.991
LOC103031298
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 
 0.930
gpi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 
 0.930
LOC103021706
Phosphoglycerate mutase; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily.
  
  
 
0.930
ENSAMXP00000029220
Glycerate kinase.
     
 0.923
phgdh
D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
   
 0.915
rbp7
Hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase).
  
 0.907
bpgm
Phosphoglycerate mutase; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily.
  
 
 
0.905
minpp1
Multiple inositol-polyphosphate phosphatase 1b; Belongs to the histidine acid phosphatase family.
     
 0.900
LOC103038634
Phosphoglycerate mutase; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily.
  
  
 
0.900
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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