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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103037936Galanin receptor 1a; Belongs to the G-protein coupled receptor 1 family. (340 aa)    
Predicted Functional Partners:
Gal
Galanin/GMAP prepropeptide.
    
 0.995
LOC103038417
Si:rp71-1c10.8.
     
 0.929
Apln
Uncharacterized protein.
     
 0.682
pomc
Proopiomelanocortin a.
   
 0.643
spx
Spexin hormone.
   
 
 0.592
LOC103023622
Somatostatin.
    
 0.575
LOC103031708
Prepronociceptin a.
    
 0.543
W5KGH0_ASTMX
Proopiomelanocortin b.
   
 0.522
nmu
Neuromedin U.
    
 0.503
agt
Angiotensinogen; Belongs to the serpin family.
    
  0.492
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.