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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103041259Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family. (223 aa)    
Predicted Functional Partners:
CLDN34
Claudin 34.
     
 0.714
W5LTP1_ASTMX
Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.
  
 
0.689
LOC103025779
Tight junction protein 1b; Belongs to the MAGUK family.
    
 0.688
LOC103046586
Tight junction protein 3; Belongs to the MAGUK family.
    
 0.685
pex19
Peroxisomal biogenesis factor 19.
    
 0.684
ENSAMXP00000042821
Uncharacterized protein.
  
 
 
0.684
LOC107196870
Uncharacterized protein.
     
 0.681
LOC111195803
Uncharacterized protein.
     
 0.681
ENSAMXP00000042630
Claudin 23b.
     
 0.681
ENSAMXP00000047178
Claudin 23a.
     
 0.681
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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