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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc35f6Solute carrier family 35 member F6; May play a role as a nucleotide-sugar transporter. (374 aa)    
Predicted Functional Partners:
nus1
NUS1 dehydrodolichyl diphosphate synthase subunit.
  
 
 0.602
faf2
Fas associated factor family member 2.
   
  
 0.590
rars2
Arginyl-tRNA synthetase 2, mitochondrial (putative); Belongs to the class-I aminoacyl-tRNA synthetase family.
     
 0.586
slc35b2
Solute carrier family 35 member B2.
      
 0.580
slc35c1
Solute carrier family 35 member C1.
   
  
 0.579
ENSAMXP00000053081
MICOS complex subunit; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.
      
 0.575
Otud4
Uncharacterized protein.
   
  
 0.562
Nudt6
Nudix (nucleoside diphosphate linked moiety X)-type motif 6; Belongs to the Nudix hydrolase family.
      
 0.520
LOC103025298
Si:ch211-141o9.10.
  
  
 0.512
SLC35E2A
Solute carrier family 35 member E2A.
      
 0.503
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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