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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103024567Lysozyme; Lysozymes have primarily a bacteriolytic function; those in tissues and body fluids are associated with the monocyte-macrophage system and enhance the activity of immunoagents. Belongs to the glycosyl hydrolase 22 family. (149 aa)    
Predicted Functional Partners:
b4galt2
UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 2.
    
 0.424
b4galt3
UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 3.
    
 0.424
LOC103028729
UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1.
    
 0.424
LOC103039461
DP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1, like.
    
 0.424
ENSAMXP00000043621
UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 4.
    
 0.424
LOC103031892
Si:dkey-199f5.8.
    
 0.424
b4galt6
UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6.
    
 0.417
LOC103033026
UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5.
    
 0.417
vamp7
Synaptobrevin-like 1; Belongs to the synaptobrevin family.
     
 0.401
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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