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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C13h1orf226Nitric oxide synthase 1 (neuronal) adaptor protein a. (707 aa)    
Predicted Functional Partners:
nup107
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
      
 0.693
PLEKHG1
Pleckstrin homology and RhoGEF domain containing G1.
      
 0.669
NKAP
NFKB activating protein.
    
   0.603
DDX41
DEAD-box helicase 41.
    
   0.600
SNTA1
Syntrophin alpha 1.
    
 
 0.580
W5K1Z5_ASTMX
Syntrophin, beta 2.
    
 
 0.580
sntb1
Syntrophin, basic 1.
    
 
 0.580
amdhd1
Amidohydrolase domain containing 1.
      
 0.573
ENSAMXP00000048002
Guanine deaminase.
      
 0.573
plgrkt
Plasminogen receptor, C-terminal lysine transmembrane protein.
      
 0.567
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.