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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ascc1Activating signal cointegrator 1 complex subunit 1. (354 aa)    
Predicted Functional Partners:
ENSAMXP00000049721
Activating signal cointegrator 1 complex subunit 2.
    
 0.956
Ascc3
Activating signal cointegrator 1 complex subunit 3.
    
 0.947
trip4
Thyroid hormone receptor interactor 4.
    
 
 0.886
Dap3
Death associated protein 3.
    
   0.859
sod2
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
    
   0.859
ybey
YbeY metalloendoribonuclease.
    
   0.859
rps11
Ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family.
    
   0.850
mrpl13
Mitochondrial ribosomal protein L13.
   
   0.775
mrpl24
Mitochondrial ribosomal protein L24; Belongs to the universal ribosomal protein uL24 family.
    
   0.768
mrpl47
Mitochondrial ribosomal protein L47.
    
   0.768
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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