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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103025391Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins. (776 aa)    
Predicted Functional Partners:
LOC103034575
Catenin, beta 2.
    
 0.490
ctnnb1
Catenin (cadherin-associated protein), beta 1.
    
 0.490
W5KDJ8_ASTMX
Junction plakoglobin b.
    
 0.472
LOC103045821
Junction plakoglobin a.
    
 0.472
W5KBS8_ASTMX
ARVCF delta catenin family member b.
   
 0.471
ENSAMXP00000029217
Uncharacterized protein.
   
 0.471
ctnnd1
Catenin (cadherin-associated protein), delta 1.
   
 0.471
LOC103028032
Bone morphogenetic protein/retinoic acid inducible neural-specific 3a, tandem duplicate 1.
  
  
 0.443
LOC111196032
Uncharacterized protein.
    
 0.432
Ctnna2
Catenin (cadherin-associated protein), alpha 2.
    
 0.432
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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