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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103037595Arachidonate 12-lipoxygenase. (669 aa)    
Predicted Functional Partners:
ENSAMXP00000047343
Uncharacterized protein.
  
 
 
0.942
pla2g12b
Phospholipase A2, group XIIB.
    
 0.917
LOC103027280
Uncharacterized protein; Belongs to the cytochrome P450 family.
   
 0.917
W5KDH4_ASTMX
Prostaglandin-endoperoxide synthase 2a.
   
 
 0.914
ptgs1
Prostaglandin-endoperoxide synthase 1.
   
 
 0.914
LOC103034574
Prostaglandin-endoperoxide synthase 2b.
   
 
 0.914
W5KDL0_ASTMX
Phospholipase A2.
   
 
 0.911
LOC103042613
Zgc:152891.
  
  
 
0.905
ENSAMXP00000041421
Uncharacterized protein.
  
  
 
0.905
pla2g12a
Phospholipase A2, group XIIA.
    
  0.905
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.