close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103043042DEAH (Asp-Glu-Ala-His) box polypeptide 32b. (733 aa)    
Predicted Functional Partners:
Utp3
UTP3 small subunit processome component.
   
 0.934
Tfip11
Tuftelin-interacting protein 11; Involved in pre-mRNA splicing, specifically in spliceosome disassembly during late-stage splicing events. Belongs to the TFP11/STIP family.
   
 0.929
snrpd3
Small nuclear ribonucleoprotein Sm D3.
   
 0.908
Snrpf
Small nuclear ribonucleoprotein polypeptide F.
   
 0.892
W5KDC8_ASTMX
Programmed cell death 11.
  
 0.881
snrpd2
Small nuclear ribonucleoprotein Sm D2.
   
 0.878
UTP14C
UTP14C small subunit processome component.
   
 0.877
snrpg
Small nuclear ribonucleoprotein G.
   
 0.875
yju2
YJU2 splicing factor homolog.
    
 0.871
syf2
SYF2 pre-mRNA-splicing factor.
    
 0.870
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.