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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tnk1Tyrosine kinase, non-receptor, 1; Belongs to the protein kinase superfamily. Tyr protein kinase family. (754 aa)    
Predicted Functional Partners:
W5LKS2_ASTMX
Uncharacterized protein.
    
 
 0.631
LOC103034468
Cell division cycle 42.
    
 
 0.631
ENSAMXP00000047571
UBA domain-containing protein.
 
     
0.602
SH3RF3
SH3 domain containing ring finger 3.
    
 
 0.577
ENSAMXP00000030238
Cell division cycle 42, like.
    
 
 0.541
LOC103039613
Uncharacterized protein.
    
 
 0.541
LOC103046713
Growth factor receptor-bound protein 2a.
    
 
 0.477
LOC103046713-2
Growth factor receptor-bound protein 2-like.
    
 
 0.477
LOC111191028
Growth factor receptor-bound protein 2b.
    
 
 0.477
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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