Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC103037808Glucose-fructose oxidoreductase domain containing 2. (374 aa)    
Predicted Functional Partners:
pyroxd1
Pyridine nucleotide-disulphide oxidoreductase domain 1.
     
 0.915
LOC107197178
Synaptogyrin.
      
 0.765
Ralgapb
Ral GTPase activating protein, beta subunit (non-catalytic).
    
   0.755
W5LQK5_ASTMX
UDP-glucose 6-dehydrogenase; Involved in the biosynthesis of glycosaminoglycans; hyaluronan, chondroitin sulfate, and heparan sulfate. Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
    
 0.661
rgn
Regucalcin.
  
 
 0.661
tbccd1
TBCC domain containing 1.
      
 0.659
ENSAMXP00000054028
Uncharacterized protein.
  
 
 0.655
aldh18a1
Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.
   
 
 0.645
gins1
GINS complex subunit 1 (Psf1 homolog).
      
 0.634
icmt
Protein-S-isoprenylcysteine O-methyltransferase.
     
 0.634
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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