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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tmem131Transmembrane protein 131. (1793 aa)    
Predicted Functional Partners:
Ralgapb
Ral GTPase activating protein, beta subunit (non-catalytic).
   
  
 0.680
erich1
Uncharacterized protein.
      
 0.571
AMIGO1
Adhesion molecule with Ig like domain 1.
      
 0.547
NAA30
N(alpha)-acetyltransferase 30, NatC catalytic subunit.
      
 0.509
Nhlrc2
NHL repeat containing 2.
      
 0.429
W5L8E0_ASTMX
Uncharacterized protein.
      
 0.426
Lrrc24
Leucine rich repeat containing 24.
      
 0.412
LOC103046551
Patatin-like phospholipase domain containing 8.
      
 0.408
vps53
VPS53 subunit of GARP complex.
      
 0.408
copb1
Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
      
 0.400
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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