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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mrps23Mitochondrial ribosomal protein S23. (181 aa)    
Predicted Functional Partners:
mrps5
Mitochondrial ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.
    
 0.997
mrps9
Mitochondrial ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
   
 0.996
mrps7
Mitochondrial ribosomal protein S7.
   
 0.994
mrps33
Mitochondrial ribosomal protein S33.
   
 0.994
mrps30
Mitochondrial ribosomal protein S30.
   
 0.993
mrps14
Mitochondrial ribosomal protein S14.
   
 0.993
chchd1
Coiled-coil-helix-coiled-coil-helix domain containing 1.
   
  0.993
mrps27
Mitochondrial ribosomal protein S27.
    
 0.992
ptcd3
Pentatricopeptide repeat domain 3.
    
 0.992
mrps22
Mitochondrial ribosomal protein S22.
   
 0.992
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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