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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5KXA4_ASTMXSecretogranin II (chromogranin C), b. (581 aa)    
Predicted Functional Partners:
ENSAMXP00000050488
Uncharacterized protein.
   
  
 0.774
Scg3
Secretogranin III.
   
  
 0.524
scg5
Secretogranin V.
   
  
 0.489
nmu
Neuromedin U.
   
  
 0.454
Cpe
Carboxypeptidase E.
   
  
 0.443
LOC103025614
Relaxin 1.
      
 0.431
LOC103035680
Si:dkey-34e4.1.
      
 0.422
C13h1orf226
Nitric oxide synthase 1 (neuronal) adaptor protein a.
      
 0.422
LOC103026217
Nitric oxide synthase 1 (neuronal) adaptor protein b.
      
 0.422
ENSAMXP00000043247
Relaxin 3b.
      
 0.422
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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