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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pex5lPeroxisomal biogenesis factor 5-like a. (612 aa)    
Predicted Functional Partners:
pex14
Peroxisomal biogenesis factor 14.
   
 0.996
Scp2
Sterol carrier protein 2a; Belongs to the thiolase-like superfamily. Thiolase family.
   
 0.996
ENSAMXP00000046481
Sterol carrier protein 2b.
   
 0.996
pex7
Peroxisomal biogenesis factor 7.
    
 0.994
LOC103034733
NBR1 autophagy cargo receptor b.
    
 0.970
nbr1
NBR1 autophagy cargo receptor a.
    
 0.970
eci2
Enoyl-CoA delta isomerase 2.
   
 0.962
pex13
Peroxisomal biogenesis factor 13.
   
 0.951
pex12
Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
   
 0.951
ephx2
Epoxide hydrolase 2, cytoplasmic.
   
 0.946
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.