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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cnnm2Cyclin and CBS domain divalent metal cation transport mediator 2a. (819 aa)    
Predicted Functional Partners:
gmps
Guanine monophosphate synthase.
  
 
 0.733
Atic
5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase.
    
 0.636
nt5e
5'-nucleotidase, ecto (CD73); Belongs to the 5'-nucleotidase family.
    
 0.625
ENSAMXP00000053026
Transient receptor potential cation channel, subfamily M, member 6.
    
 
 0.552
LOC103025310
5'-nucleotidase, cytosolic IIb.
      
 0.521
ybey
YbeY metalloendoribonuclease.
  
  
 0.512
LOC103042327
Protein tyrosine phosphatase 4A2b.
    
 
 0.464
LOC103037233
Protein tyrosine phosphatase 4A1.
    
 
 0.464
LOC103029087
Protein tyrosine phosphatase 4A3b.
    
 
 0.433
LOC103031245
Protein tyrosine phosphatase 4A3a.
    
 
 0.433
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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