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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103033252Guanine nucleotide binding protein (G protein), alpha 11b (Gq class). (402 aa)    
Predicted Functional Partners:
LOC103042724
Regulator of G protein signaling 2.
    
 0.830
LOC103030165
WD_REPEATS_REGION domain-containing protein.
   
 0.788
gnb1
Guanine nucleotide binding protein (G protein), beta polypeptide 1a.
   
 0.788
LOC103029911
Guanine nucleotide binding protein (G protein), beta polypeptide 4b.
   
 0.788
LOC103031762
Guanine nucleotide binding protein (G protein), beta polypeptide 2.
   
 0.788
LOC103023031
Guanine nucleotide binding protein (G protein), beta polypeptide 1b.
   
 0.788
LOC103032917
Guanine nucleotide binding protein (G protein), beta 5a.
   
 0.781
ENSAMXP00000031423
Guanine nucleotide binding protein (G protein), beta 5b.
   
 0.781
LOC103042898
Guanine nucleotide binding protein (G protein), beta polypeptide 3a.
   
 0.770
LOC103040197
Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.
    
 0.769
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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