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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AdnpActivity-dependent neuroprotector homeobox b. (1073 aa)    
Predicted Functional Partners:
ENSAMXP00000028064
Uncharacterized protein.
   
 
 0.606
Trip12
Thyroid hormone receptor interactor 12.
   
  
 0.525
ENSAMXP00000039594
Uncharacterized protein.
   
  
 0.525
BPTF
Bromodomain PHD finger transcription factor.
   
  
 0.500
LOC103026062
Bromodomain PHD finger transcription factor.
   
  
 0.500
LOC103022779
Ash1 (absent, small, or homeotic)-like (Drosophila).
   
  
 0.489
LOC103036607
Bromo domain-containing protein.
   
  
 0.489
ENSAMXP00000031185
C-C motif chemokine.
  
     0.471
W5LFZ3_ASTMX
AT rich interactive domain 1B (SWI1-like).
   
 
 0.448
W5KYV8_ASTMX
Ring finger protein 111.
  
  
 0.433
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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