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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103028270Membrane protein, palmitoylated 2b (MAGUK p55 subfamily member 2); Belongs to the MAGUK family. (561 aa)    
Predicted Functional Partners:
Lin7c
Lin-7 homolog C (C. elegans).
    
 0.719
W5KUX5_ASTMX
Lin-7 homolog B (C. elegans).
    
 0.719
ENSAMXP00000042620
Uncharacterized protein.
    
 0.719
Lin7a
Lin-7 homolog A (C. elegans).
    
 0.719
W5KCW8_ASTMX
Amyloid beta (A4) precursor protein-binding, family A, member 2b.
   
 0.656
Apba1
Amyloid beta (A4) precursor protein-binding, family A, member 1a.
   
 0.656
LOC103039832
Amyloid beta precursor protein binding family A member 3.
   
 0.656
LOC103042206
Amyloid beta (A4) precursor protein-binding, family A, member 1b.
   
 0.656
LOC103028541
Amyloid beta (A4) precursor protein-binding, family A, member 2a.
   
 0.656
LOC103040550
Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.
    
 0.566
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.