STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103027261Nucleic acid binding protein 1a. (212 aa)    
Predicted Functional Partners:
Ints3
Integrator complex subunit 3.
    
 0.933
Ints1
Integrator complex subunit 1.
    
 0.902
ints5
Integrator complex subunit 5.
    
 0.902
inip
Ints3 and nabp interacting protein.
    
 
 0.826
LOC107197887
Integrator complex subunit 6 like.
    
 0.740
W5L227_ASTMX
Integrator complex subunit 6.
    
 0.740
ints9
Integrator complex subunit 9.
   
 0.704
ints11
Integrator complex subunit 11.
   
 0.694
Ints7
Integrator complex subunit 7.
     
 0.660
Ints12
Integrator complex subunit 12.
   
 
  0.649
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.