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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103028101Zgc:153901. (330 aa)    
Predicted Functional Partners:
gart
Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family.
    
 0.927
LOC103042060
Methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2 like.
    
 0.811
mthfd2
Uncharacterized protein.
    
 0.811
W5K7J1_ASTMX
Methenyltetrahydrofolate synthetase domain containing.
    
 0.790
mthfs
5-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family.
    
 0.790
W5KIP4_ASTMX
Uncharacterized protein.
    
 0.751
mthfd1
Methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1b.
    
 0.751
mthfd1l
Methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like.
    
 0.751
W5KSF7_ASTMX
Histidine ammonia-lyase; Belongs to the PAL/histidase family.
 
  
 0.718
LOC103041200
Histidine ammonia-lyase; Belongs to the PAL/histidase family.
 
  
 0.718
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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