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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
b4galt2UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 2. (381 aa)    
Predicted Functional Partners:
b3gat2
Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase; Belongs to the glycosyltransferase 43 family.
 
 
 
 0.950
LOC103043605
Alpha-(1,6)-fucosyltransferase; Catalyzes the addition of fucose in alpha 1-6 linkage to the first GlcNAc residue, next to the peptide chains in N-glycans. Belongs to the glycosyltransferase 23 family.
     
 0.923
fut8
Alpha-(1,6)-fucosyltransferase; Catalyzes the addition of fucose in alpha 1-6 linkage to the first GlcNAc residue, next to the peptide chains in N-glycans. Belongs to the glycosyltransferase 23 family.
     
 0.923
W5L930_ASTMX
Uncharacterized protein.
     
 0.918
b3gnt3
Hexosyltransferase.
   
 
 0.918
LOC103031874
ST6 beta-galactosamide alpha-2,6-sialyltranferase 2b; Belongs to the glycosyltransferase 29 family.
     
 0.917
LOC103030360
Uncharacterized protein; Belongs to the glycosyltransferase 29 family.
     
 0.917
st6gal2
ST6 beta-galactosamide alpha-2,6-sialyltranferase 2a; Belongs to the glycosyltransferase 29 family.
     
 0.917
B3GNT10
Hexosyltransferase.
   
 
 0.916
B3GALT1
Hexosyltransferase.
   
 
 0.914
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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