close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ccdc24Uncharacterized protein. (438 aa)    
Predicted Functional Partners:
isca1
Iron-sulfur cluster assembly 1.
      
 0.655
rabl2b
RAB, member of RAS oncogene family-like 2.
   
    0.633
b4galt2
UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 2.
      
 0.564
LOC103038761
Zinc finger protein 644a.
      
 0.506
Znf644
Zinc finger protein 644b.
      
 0.506
LOC103033710
Kruppel-like factor 5 like.
      
 0.493
Isca2
Iron-sulfur cluster assembly 2.
      
 0.445
rab11a
RAB11a, member RAS oncogene family.
   
    0.432
W5KCN9_ASTMX
Ring finger protein 220b.
      
 0.432
W5LR63_ASTMX
RAB11a, member RAS oncogene family, like.
   
    0.432
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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