close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103037445GC vitamin D binding protein. (472 aa)    
Predicted Functional Partners:
Ttr
Transthyretin; Thyroid hormone-binding protein. Probably transports thyroxine from the bloodstream to the brain.
   
  
 0.856
ambp
Alpha-1-microglobulin/bikunin precursor.
   
 
 0.853
fgb
Fibrinogen beta chain.
   
 
 0.824
serpinc1
Serpin peptidase inhibitor, clade C (antithrombin), member 1; Belongs to the serpin family.
   
 
 0.822
fgg
Fibrinogen gamma chain.
   
  
 0.805
LOC111194259
Alpha-2-HS-glycoprotein 2.
   
  
 0.790
LOC103026828
Uncharacterized protein.
   
  
 0.790
cubn
Cubilin (intrinsic factor-cobalamin receptor).
    
 0.785
cdcp2
CUB domain containing protein 2.
    
 0.785
f2
Coagulation factor II (thrombin); Belongs to the peptidase S1 family.
   
  
 0.773
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
Server load: low (22%) [HD]