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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C25h20orf194Si:ch211-194c3.5. (1105 aa)    
Predicted Functional Partners:
LOC103026579
Dynein, light chain, Tctex-type 3.
    
 
 0.667
LOC103025073
Dynein light chain roadblock-type 2.
    
 
 0.535
ENSAMXP00000044524
REJ domain-containing protein.
    
 
 0.535
dnal4
Dynein light chain.
    
 
 0.512
ENSAMXP00000034085
Dynein, axonemal, intermediate chain 2b.
    
 
 0.459
Dnai1
Dynein, axonemal, intermediate chain 1, paralog 2.
    
 
 0.443
LOC103031228
Nuclear receptor interacting protein 2.
      
 0.433
LOC103028862
Dynein light chain.
    
 
 0.419
LOC103028862-2
Dynein light chain 2, cytoplasmic.
    
 
 0.419
ENSAMXP00000037290
Dynein light chain.
    
 
 0.419
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.